Tag Archives: bacteria
Cellular automaton model of bacterial biosensors
So this fortnight at the doctoral training centre, we’ve been from “Hello World” to image processing in C and Perl. Yeah. Anyway, before my brain explodes from over-knowledge-ness, I thought I’d blog about the program I made! It’s a cellular … Continue reading
Posted in Geeking, Science
Tagged bacteria, bacterial biosensor, biological modelling, C, cellular automaton
Leave a comment
Modifying a FLAME model
As I mentioned in my previous post about my adventures in FLAME modelling, I started out with code from my lecturer. I started with three two-dimensional models, each of which contained a different type (genus) of bacteria (Vibrio, Sar11 and … Continue reading
Posted in Geeking, Science
Tagged agent-based modelling, bacteria, bacteriophage, C, command line, FLAME, Linux, linux command line, modelling, phage, XML
Leave a comment
Running FLAME models at the Linux command line
Update: I’ve written another post about how I edited the model. Last week, I modified a FLAME model to make it 3D and added some other features (with help from my John). This animation is of the model running, with … Continue reading
Posted in Geeking, Science
Tagged agent-based modelling, bacteria, bacteriophage, C, command line, FLAME, Linux, linux command line, modelling, phage, XML
2 Comments